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    OSTLU_15585 hypothetical protein [ Ostreococcus lucimarinus CCE9901 ]

    Gene ID: 5001882, updated on 21-Dec-2023

    Summary

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    Gene symbol
    OSTLU_15585
    Gene description
    hypothetical protein
    Locus tag
    OSTLU_15585
    Gene type
    protein coding
    RNA name
    predicted protein
    RefSeq status
    PROVISIONAL
    Organism
    Ostreococcus lucimarinus CCE9901 (strain: CCE9901)
    Lineage
    Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
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    Genomic context

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    See OSTLU_15585 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_009359.1 (781545..782396)

    Chromosome 5 - NC_009359.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009359.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation. Palenik B, et al. Proc Natl Acad Sci U S A, 2007 May 1. PMID 17460045, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_009359.1 Reference assembly

      Range
      781545..782396
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001417832.1 → XP_001417869.1  predicted protein [Ostreococcus lucimarinus CCE9901]

      See identical proteins and their annotated locations for XP_001417869.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A4RY51
      Conserved Domains (2) summary
      smart00401
      Location:199 → 255
      ZnF_GATA; zinc finger binding to DNA consensus sequence [AT]GATA[AG]
      cl00158
      Location:203 → 249
      ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
    Nucleotide Protein
    Heading Accession and Version

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