U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    YALI1_E29005g uncharacterized protein [ Yarrowia lipolytica ]

    Gene ID: 2912546, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    YALI1_E29005g
    Gene description
    uncharacterized protein
    Locus tag
    YALI1_E29005g
    See related
    FungiDB:YALI1_E29005g; VEuPathDB:YALI1_E29005g
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Yarrowia lipolytica (strain: CLIB89(W29), culture-collection: ATCC:20460)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Dipodascomycetes; Dipodascales; Dipodascales incertae sedis; Yarrowia
    Old locus tag
    YALI2_E00490g
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See YALI1_E29005g in Genome Data Viewer
    Location:
    chromosome: 1E
    Exon count:
    1
    Sequence:
    Chromosome: 1E; NC_090774.1 (2900509..2901198)

    Chromosome 1E - NC_090774.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_090774.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Sequence Assembly of Yarrowia lipolytica Strain W29/CLIB89 Shows Transposable Element Diversity. Magnan C, et al. PLoS One, 2016. PMID 27603307, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein
    XP_504349.1
    • Compare to YALI0E24365g, similar to Saccharomyces cerevisiae FYV7 (YLR068W); ancestral locus Anc_8.19, weakly similar to DEHA0E13926g Debaryomyces hansenii

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_090774.1 Reference assembly

      Range
      2900509..2901198
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_504349.2 → XP_504349.1  uncharacterized protein YALI1_E29005g [Yarrowia lipolytica]

      See identical proteins and their annotated locations for XP_504349.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q6C4R3
      UniProtKB/TrEMBL
      A0A1D8NJV5
      Conserved Domains (1) summary
      pfam08524
      Location:144 → 229
      rRNA_processing; rRNA processing
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials