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    LARP7 La ribonucleoprotein 7, transcriptional regulator [ Apteryx rowi (Okarito brown kiwi) ]

    Gene ID: 112971364, updated on 15-Mar-2024

    Summary

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    Gene symbol
    LARP7
    Gene description
    La ribonucleoprotein 7, transcriptional regulator
    See related
    Ensembl:ENSARWG00000004626
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Apteryx rowi
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
    Orthologs
    human mouse all
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    Genomic context

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    See LARP7 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    100 current aptRow1 (GCF_003343035.1) Unplaced Scaffold NW_020450692.1 (347670..377637)

    NW_020450692.1Genomic Context describing neighboring genes Neighboring gene alpha kinase 1 Neighboring gene zinc finger GRF-type containing 1 Neighboring gene uncharacterized LOC112971370 Neighboring gene uncharacterized LOC112971369

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020450692 Unplaced Scaffold Reference aptRow1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in RNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    la-related protein 7
    Names
    La ribonucleoprotein domain family member 7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Apteryx rowi Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference aptRow1

    Genomic

    1. NW_020450692.1 Reference aptRow1

      Range
      347670..377637
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026076729.1 → XP_025932514.1  la-related protein 7 isoform X1

      Conserved Domains (3) summary
      cd08032
      Location:32 → 113
      LARP_7; La RNA-binding domain of La-related protein 7
      cd12290
      Location:128 → 207
      RRM1_LARP7; RNA recognition motif 1 in La-related protein 7 (LARP7) and similar proteins
      cd12542
      Location:467 → 548
      RRM2_LARP7; RNA recognition motif 2 in La-related protein 7 (LARP7) and similar proteins

    2. XM_026076728.1 → XP_025932513.1  la-related protein 7 isoform X1

      Related
      ENSARWP00000006550.1, ENSARWT00000007497.1
      Conserved Domains (3) summary
      cd08032
      Location:32 → 113
      LARP_7; La RNA-binding domain of La-related protein 7
      cd12290
      Location:128 → 207
      RRM1_LARP7; RNA recognition motif 1 in La-related protein 7 (LARP7) and similar proteins
      cd12542
      Location:467 → 548
      RRM2_LARP7; RNA recognition motif 2 in La-related protein 7 (LARP7) and similar proteins

    3. XM_026076733.1 → XP_025932518.1  la-related protein 7 isoform X3

      Related
      ENSARWP00000006555.1, ENSARWT00000007502.1
      Conserved Domains (3) summary
      cd08032
      Location:32 → 113
      LARP_7; La RNA-binding domain of La-related protein 7
      cd12290
      Location:128 → 207
      RRM1_LARP7; RNA recognition motif 1 in La-related protein 7 (LARP7) and similar proteins
      cd12542
      Location:467 → 548
      RRM2_LARP7; RNA recognition motif 2 in La-related protein 7 (LARP7) and similar proteins

    4. XM_026076734.1 → XP_025932519.1  la-related protein 7 isoform X4

      Conserved Domains (3) summary
      cd08032
      Location:32 → 113
      LARP_7; La RNA-binding domain of La-related protein 7
      cd12290
      Location:128 → 207
      RRM1_LARP7; RNA recognition motif 1 in La-related protein 7 (LARP7) and similar proteins
      cd12542
      Location:467 → 548
      RRM2_LARP7; RNA recognition motif 2 in La-related protein 7 (LARP7) and similar proteins

    5. XM_026076732.1 → XP_025932517.1  la-related protein 7 isoform X2

      Related
      ENSARWP00000006551.1, ENSARWT00000007498.1
      Conserved Domains (3) summary
      cd08032
      Location:32 → 113
      LARP_7; La RNA-binding domain of La-related protein 7
      cd12290
      Location:128 → 207
      RRM1_LARP7; RNA recognition motif 1 in La-related protein 7 (LARP7) and similar proteins
      cd12542
      Location:467 → 548
      RRM2_LARP7; RNA recognition motif 2 in La-related protein 7 (LARP7) and similar proteins

    6. XM_026076730.1 → XP_025932515.1  la-related protein 7 isoform X1

      Conserved Domains (3) summary
      cd08032
      Location:32 → 113
      LARP_7; La RNA-binding domain of La-related protein 7
      cd12290
      Location:128 → 207
      RRM1_LARP7; RNA recognition motif 1 in La-related protein 7 (LARP7) and similar proteins
      cd12542
      Location:467 → 548
      RRM2_LARP7; RNA recognition motif 2 in La-related protein 7 (LARP7) and similar proteins

    7. XM_026076731.1 → XP_025932516.1  la-related protein 7 isoform X1

      Related
      ENSARWP00000006554.1, ENSARWT00000007501.1
      Conserved Domains (3) summary
      cd08032
      Location:32 → 113
      LARP_7; La RNA-binding domain of La-related protein 7
      cd12290
      Location:128 → 207
      RRM1_LARP7; RNA recognition motif 1 in La-related protein 7 (LARP7) and similar proteins
      cd12542
      Location:467 → 548
      RRM2_LARP7; RNA recognition motif 2 in La-related protein 7 (LARP7) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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