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    LINC02992 long intergenic non-protein coding RNA 2992 [ Homo sapiens (human) ]

    Gene ID: 100499194, updated on 10-Dec-2024

    Summary

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    Official Symbol
    LINC02992provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 2992provided by HGNC
    Primary source
    HGNC:HGNC:49287
    See related
    AllianceGenome:HGNC:49287
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    See LINC02992 in Genome Data Viewer
    Location:
    2q14.1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (113977669..113979984, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (114402307..114404622, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (114735246..114737561, complement)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene ACTR3 antisense RNA 1 Neighboring gene uncharacterized LOC124906071 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16428 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16429 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16430 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16431 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:114647589-114648244 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16433 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16432 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11890 Neighboring gene actin related protein 3 Neighboring gene Sharpr-MPRA regulatory region 10480 Neighboring gene long intergenic non-protein coding RNA 1191 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16434 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11891 Neighboring gene small nucleolar RNA U3 Neighboring gene uncharacterized LOC124907876

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. Kimura K, et al. Genome Res, 2006 Jan. PMID 16344560, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Markers

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_034130.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC110769

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

      Range
      113977669..113979984 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060926.1 Alternate T2T-CHM13v2.0

      Range
      114402307..114404622 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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