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    Snord3b4 small nucleolar RNA, C/D box 3B4 [ Mus musculus (house mouse) ]

    Gene ID: 19861, updated on 17-Aug-2024

    Summary

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    Official Symbol
    Snord3b4provided by MGI
    Official Full Name
    small nucleolar RNA, C/D box 3B4provided by MGI
    Primary source
    MGI:MGI:97988
    See related
    Ensembl:ENSMUSG00002074955 AllianceGenome:MGI:97988
    Gene type
    snRNA
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Rnu3b4; Rnu3b-4; 1810064A23Rik
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    Genomic context

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    See Snord3b4 in Genome Data Viewer
    Location:
    11 C; 11 52.11 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (87353112..87353329)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (87462286..87462503)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene testis expressed gene 14 intercellular bridge forming factor Neighboring gene STARR-positive B cell enhancer mm9_chr11:87261696-87261996 Neighboring gene STARR-positive B cell enhancer mm9_chr11:87262254-87262555 Neighboring gene predicted gene, 23137 Neighboring gene small nucleolar RNA, C/D box 3B3 Neighboring gene STARR-positive B cell enhancer ABC_E3992 Neighboring gene STARR-seq mESC enhancer starr_30291 Neighboring gene small nucleolar RNA, C/D box 3B2 Neighboring gene STARR-seq mESC enhancer starr_30292 Neighboring gene predicted gene, 34000

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Organization of the gene family encoding mouse U3B RNA: role of gene conversions in its concerted evolution. Mazan S, et al. Gene, 1990 Oct 15. PMID 2258057
    2. Composition and chromosomal localization of the small multigene family encoding mouse U3B nucleolar RNA. Mazan S, et al. Cytogenet Cell Genet, 1991. PMID 2004550
    3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Other Names

    • U3B small nuclear RNA 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_002843.2 RNA Sequence

      Status: PROVISIONAL

      Source sequence(s)
      AK019039
      Related
      ENSMUST00020183227.1

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      87353112..87353329
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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