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    organic solute transporter ostalpha protein (DUF300) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828242, updated on 18-Sep-2024

    Summary

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    Official Full Name
    organic solute transporter ostalpha protein (DUF300)
    Primary source
    TAIR:AT4G21570
    Locus tag
    AT4G21570
    See related
    Araport:AT4G21570
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F17L22.30
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    5
    Sequence:
    Chromosome: 4; NC_003075.7 (11470761..11473037, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene VP1/ABI3-like 3 Neighboring gene vacuolar protein sorting-associated protein-like protein Neighboring gene oxidoreductase, zinc-binding dehydrogenase family protein Neighboring gene endonuclease 4 Neighboring gene endonuclease 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
    2. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001341500.1
    NM_118277.5

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in endoplasmic reticulum HDA PubMed 

    General protein information

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    Preferred Names
    organic solute transporter ostalpha protein (DUF300)
    NP_193888.1
    • Protein of unknown function (DUF300); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF300 (InterPro:IPR005178); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF300) (TAIR:AT1G11200.1); Has 836 Blast hits to 835 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 284; Fungi - 192; Plants - 240; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      11470761..11473037 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118277.5 → NP_193888.1  organic solute transporter ostalpha protein (DUF300) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193888.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V0I1, A0A5S9XUW8, O65422
      Conserved Domains (1) summary
      pfam03619
      Location:14 → 280
      Solute_trans_a; Organic solute transporter Ostalpha

    2. NM_001341500.1 → NP_001329391.1  organic solute transporter ostalpha protein (DUF300) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B7M3, A0A5S9XUW8
    Nucleotide Protein
    Heading Accession and Version

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