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    LOC101777709 protein DGS1, mitochondrial [ Setaria italica (foxtail millet) ]

    Gene ID: 101777709, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC101777709
    Gene description
    protein DGS1, mitochondrial
    Locus tag
    SETIT_034759mg
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Setaria italica
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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    Genomic context

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    See LOC101777709 in Genome Data Viewer
    Location:
    chromosome: IX
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current Setaria_italica_v2.0 (GCF_000263155.2) IX NC_028458.1 (46079585..46086342, complement)
    101 previous assembly Setaria V1 (GCF_000263155.1) Unplaced Scaffold NW_004675969.1 (46079824..46086535, complement)

    Chromosome IX - NC_028458.1Genomic Context describing neighboring genes Neighboring gene annexin D3 Neighboring gene annexin D4 Neighboring gene E3 ubiquitin-protein ligase SINAT3 Neighboring gene uncharacterized protein At5g39865

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in mitochondrial outer membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein DGS1, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Setaria italica Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Setaria_italica_v2.0 Primary Assembly

    Genomic

    1. NC_028458.1 Reference Setaria_italica_v2.0 Primary Assembly

      Range
      46079585..46086342 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004984277.3 → XP_004984334.1  protein DGS1, mitochondrial

      UniProtKB/TrEMBL
      K4A7A3
      Conserved Domains (1) summary
      pfam08637
      Location:323 → 594
      NCA2; ATP synthase regulation protein NCA2
    Nucleotide Protein Strain
    Heading Accession and Version

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