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    LOW protein: protein phosphatase 1 regulatory subunit-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838308, updated on 18-Sep-2024

    Summary

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    Official Full Name
    LOW protein: protein phosphatase 1 regulatory subunit-like protein
    Primary source
    TAIR:AT1G17360
    Locus tag
    AT1G17360
    See related
    Araport:AT1G17360
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F28G4.18; F28G4_18
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    10
    Sequence:
    Chromosome: 1; NC_003070.9 (5946448..5951561)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene SAUR-like auxin-responsive protein family Neighboring gene NADH:ubiquinone oxidoreductase intermediate-associated protein 30 Neighboring gene ncRNA Neighboring gene oligouridylate binding protein 1B Neighboring gene jasmonate-zim-domain protein 5 Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics. Kim TW, et al. Plant Cell, 2023 Mar 15. PMID 36660928, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_101597.6

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    LOW protein: protein phosphatase 1 regulatory subunit-like protein
    NP_173179.4
    • BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT1G72410.1); Has 9949 Blast hits to 7480 proteins in 576 species: Archae - 12; Bacteria - 1007; Metazoa - 3636; Fungi - 982; Plants - 444; Viruses - 50; Other Eukaryotes - 3818 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      5946448..5951561
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101597.6 → NP_173179.4  LOW protein: protein phosphatase 1 regulatory subunit-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173179.4

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WJ84, A0A654ELF1, Q9LQI8
    Nucleotide Protein
    Heading Accession and Version

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