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    RBL12 RHOMBOID-like protein 12 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838441, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RBL12
    Official Full Name
    RHOMBOID-like protein 12
    Primary source
    TAIR:AT1G18600
    Locus tag
    AT1G18600
    See related
    Araport:AT1G18600
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS RHOMBOID-LIKE PROTEIN 12; AtPARL; ATRBL12; F25I16.6; F25I16_6; PARL; presenilins-associated rhomboid-like protein; RHOMBOID-like protein 12
    Summary
    Mitochondrion-located rhomboid-like protein
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    Genomic context

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    See RBL12 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    8
    Sequence:
    Chromosome: 1; NC_003070.9 (6400282..6402794)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene galacturonosyltransferase 11 Neighboring gene sulfotransferase 17 Neighboring gene Galactose oxidase/kelch repeat superfamily protein Neighboring gene LONGIFOLIA protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Plant mitochondrial rhomboid, AtRBL12, has different substrate specificity from its yeast counterpart. Kmiec-Wisniewska B, et al. Plant Mol Biol, 2008 Sep. PMID 18543065
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_101718.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RHOMBOID-like protein 12
    NP_564058.1
    • RHOMBOID-like protein 12 (RBL12); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: Rhomboid-related intramembrane serine protease family protein (TAIR:AT1G74130.1); Has 3270 Blast hits to 3270 proteins in 960 species: Archae - 107; Bacteria - 1998; Metazoa - 110; Fungi - 132; Plants - 58; Viruses - 0; Other Eukaryotes - 865 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      6400282..6402794
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101718.5 → NP_564058.1  RHOMBOID-like protein 12 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564058.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FZ81
      UniProtKB/TrEMBL
      A0A178WDJ5, A0A5S9V1M0
      Conserved Domains (1) summary
      pfam01694
      Location:170 → 318
      Rhomboid; Rhomboid family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FZ81.1

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