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    Phenazine biosynthesis PhzC/PhzF protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828159, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Phenazine biosynthesis PhzC/PhzF protein
    Primary source
    TAIR:AT4G02860
    Locus tag
    AT4G02860
    See related
    Araport:AT4G02860
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T5J8.18; T5J8_18
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    6
    Sequence:
    Chromosome: 4; NC_003075.7 (1268618..1270539, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Small nuclear ribonucleoprotein family protein Neighboring gene phenazine biosynthesis PhzC/PhzF family protein Neighboring gene B3 domain protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_116520.4

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    involved_in biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Phenazine biosynthesis PhzC/PhzF protein
    NP_192195.2
    • Phenazine biosynthesis PhzC/PhzF protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phenazine biosynthesis PhzC/PhzF protein (InterPro:IPR003719); BEST Arabidopsis thaliana protein match is: Phenazine biosynthesis PhzC/PhzF protein (TAIR:AT1G03210.1); Has 4066 Blast hits to 4061 proteins in 1265 species: Archae - 50; Bacteria - 3051; Metazoa - 120; Fungi - 130; Plants - 90; Viruses - 0; Other Eukaryotes - 625 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      1268618..1270539 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116520.4 → NP_192195.2  Phenazine biosynthesis PhzC/PhzF protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_192195.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V5V6, F4JHW1
      Conserved Domains (1) summary
      pfam02567
      Location:31 → 309
      PhzC-PhzF; Phenazine biosynthesis-like protein
    Nucleotide Protein
    Heading Accession and Version

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