U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    PRA8 PRA1 (Prenylated rab acceptor) family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820581, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    PRA8
    Official Full Name
    PRA1 (Prenylated rab acceptor) family protein
    Primary source
    TAIR:AT3G13720
    Locus tag
    AT3G13720
    See related
    Araport:AT3G13720
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    PRA1.F3; PRENYLATED RAB ACCEPTOR 1.F3
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See PRA8 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (4494979..4496800, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene kinase with adenine nucleotide alpha hydrolases-like domain-containing protein Neighboring gene RNA-binding (RRM/RBD/RNP motifs) family protein Neighboring gene prenylated RAB acceptor 1.F4 Neighboring gene ncRNA Neighboring gene cytochrome P450, family 90, subfamily D, polypeptide 1 Neighboring gene Ribonuclease III family protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Identification of proteins interacting with Arabidopsis ACD11. Petersen NH, et al. J Plant Physiol, 2009 Apr 1. PMID 18845362
    2. The PRA1 gene family in Arabidopsis. Alvim Kamei CL, et al. Plant Physiol, 2008 Aug. PMID 18583532, Free PMC Article
    3. A mesoscale abscisic acid hormone interactome reveals a dynamic signaling landscape in Arabidopsis. Lumba S, et al. Dev Cell, 2014 May 12. PMID 24823379
    4. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
    5. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help
    NM_112222.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within vesicle-mediated transport IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    PRA1 (Prenylated rab acceptor) family protein
    NP_566461.1
    • PRA8; CONTAINS InterPro DOMAIN/s: Prenylated rab acceptor PRA1 (InterPro:IPR004895); BEST Arabidopsis thaliana protein match is: prenylated RAB acceptor 1.F4 (TAIR:AT3G13710.1); Has 408 Blast hits to 408 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 29; Fungi - 28; Plants - 309; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      4494979..4496800 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112222.4 → NP_566461.1  PRA1 (Prenylated rab acceptor) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566461.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L959, Q9LIC6
      UniProtKB/TrEMBL
      A0A178VJ14, A0A654F8J6
      Conserved Domains (1) summary
      pfam03208
      Location:32 → 171
      PRA1; PRA1 family protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LIC6.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools