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    LOC110832502 double-strand-break repair protein rad21 homolog [ Zootermopsis nevadensis ]

    Gene ID: 110832502, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC110832502
    Gene description
    double-strand-break repair protein rad21 homolog
    Locus tag
    L798_08884
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Zootermopsis nevadensis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Polyneoptera; Dictyoptera; Blattodea; Blattoidea; Termitoidae; Termopsidae; Zootermopsis
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    Genomic context

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    See LOC110832502 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    100 current ZooNev1.0 (GCF_000696155.1) Unplaced Scaffold NW_019059965.1 (372238..394499, complement)

    NW_019059965.1Genomic Context describing neighboring genes Neighboring gene chaperonin containing TCP1 subunit 1 Neighboring gene T-complex protein 1 subunit alpha-like Neighboring gene uncharacterized LOC110832492 Neighboring gene ER membrane protein complex subunit 2-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_019059965 Unplaced Scaffold Reference ZooNev1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chromatin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mitotic sister chromatid cohesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in replication-born double-strand break repair via sister chromatid exchange IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in synaptonemal complex assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cohesin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synaptonemal complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    double-strand-break repair protein rad21 homolog
    Names
    Double-strand-break repair protein rad21-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Zootermopsis nevadensis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ZooNev1.0 Primary Assembly

    Genomic

    1. NW_019059965.1 Reference ZooNev1.0 Primary Assembly

      Range
      372238..394499 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022069583.1 → XP_021925275.1  double-strand-break repair protein rad21 homolog isoform X1

      Conserved Domains (2) summary
      pfam04824
      Location:794 → 845
      Rad21_Rec8; Conserved region of Rad21 / Rec8 like protein
      pfam04825
      Location:1 → 104
      Rad21_Rec8_N; N terminus of Rad21 / Rec8 like protein

    2. XM_022069584.1 → XP_021925276.1  double-strand-break repair protein rad21 homolog isoform X2

      UniProtKB/TrEMBL
      A0A067R386
      Conserved Domains (2) summary
      pfam04824
      Location:789 → 840
      Rad21_Rec8; Conserved region of Rad21 / Rec8 like protein
      pfam04825
      Location:1 → 104
      Rad21_Rec8_N; N terminus of Rad21 / Rec8 like protein

    3. XM_022069582.1 → XP_021925274.1  double-strand-break repair protein rad21 homolog isoform X1

      Conserved Domains (2) summary
      pfam04824
      Location:794 → 845
      Rad21_Rec8; Conserved region of Rad21 / Rec8 like protein
      pfam04825
      Location:1 → 104
      Rad21_Rec8_N; N terminus of Rad21 / Rec8 like protein
    Nucleotide Protein
    Heading Accession and Version

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