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    LOC9305668 glycerophosphodiester phosphodiesterase GDPDL3 [ Arabidopsis lyrata subsp. lyrata ]

    Gene ID: 9305668, updated on 21-Dec-2023

    Summary

    Gene symbol
    LOC9305668
    Gene description
    glycerophosphodiester phosphodiesterase GDPDL3
    Locus tag
    ARALYDRAFT_492137
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MRH5/SHV3
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    Genomic context

    See LOC9305668 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302549.1 (6537395..6541075)

    NW_003302549.1Genomic Context describing neighboring genes Neighboring gene DNA topoisomerase 1 alpha Neighboring gene fimbrin-1 Neighboring gene pentatricopeptide repeat-containing protein At4g26680, mitochondrial Neighboring gene transfer RNA alanine (anticodon AGC) Neighboring gene uncharacterized LOC9303621 Neighboring gene uncharacterized LOC9303622

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NW_003302549 Unplaced Scaffold Reference v.1.0 Primary Assembly

    General protein information

    Preferred Names
    glycerophosphodiester phosphodiesterase GDPDL3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference v.1.0 Primary Assembly

    Genomic

    1. NW_003302549.1 Reference v.1.0 Primary Assembly

      Range
      6537395..6541075
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021017644.1XP_020873303.1  glycerophosphodiester phosphodiesterase GDPDL3

      UniProtKB/TrEMBL
      D7MF64
      Conserved Domains (2) summary
      cd08603
      Location:41340
      GDPD_SHV3_repeat_1; Glycerophosphodiester phosphodiesterase domain repeat 1 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins
      cd08604
      Location:357657
      GDPD_SHV3_repeat_2; Glycerophosphodiester phosphodiesterase domain repeat 2 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins