U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    LOC9316405 sister-chromatid cohesion protein 3 [ Arabidopsis lyrata subsp. lyrata ]

    Gene ID: 9316405, updated on 21-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC9316405
    Gene description
    sister-chromatid cohesion protein 3
    Locus tag
    ARALYDRAFT_904275
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    SCC3
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC9316405 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302552.1 (23256421..23262031)

    NW_003302552.1Genomic Context describing neighboring genes Neighboring gene trafficking protein particle complex subunit 13 Neighboring gene NPL4-like protein 2 Neighboring gene protein SLOW WALKER 1 Neighboring gene pentatricopeptide repeat-containing protein At2g48000

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_003302552 Unplaced Scaffold Reference v.1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chromatin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in sister chromatid cohesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of chromatin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of cohesin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    sister-chromatid cohesion protein 3
    Names
    sister-chromatide cohesion protein 3

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference v.1.0 Primary Assembly

    Genomic

    1. NW_003302552.1 Reference v.1.0 Primary Assembly

      Range
      23256421..23262031
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002880292.2 → XP_002880338.1  sister-chromatid cohesion protein 3

      See identical proteins and their annotated locations for XP_002880338.1

      UniProtKB/TrEMBL
      D7LHE4
      Conserved Domains (1) summary
      pfam08514
      Location:130 → 234
      STAG; STAG domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials