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    LOC9325329 probable folate-biopterin transporter 3 [ Arabidopsis lyrata subsp. lyrata ]

    Gene ID: 9325329, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC9325329
    Gene description
    probable folate-biopterin transporter 3
    Locus tag
    ARALYDRAFT_477147
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    See LOC9325329 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302554.1 (18807765..18810382)

    NW_003302554.1Genomic Context describing neighboring genes Neighboring gene wall-associated receptor kinase-like 10 Neighboring gene nudix hydrolase 3 Neighboring gene AP2-like ethylene-responsive transcription factor At1g79700 Neighboring gene aspartyl protease family protein At5g10770 Neighboring gene lysophospholipid acyltransferase LPEAT1 Neighboring gene protein HEADING DATE REPRESSOR 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003302554 Unplaced Scaffold Reference v.1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable folate-biopterin transporter 3
    Names
    integral membrane transporter family protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference v.1.0 Primary Assembly

    Genomic

    1. NW_003302554.1 Reference v.1.0 Primary Assembly

      Range
      18807765..18810382
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002887755.2 → XP_002887801.1  probable folate-biopterin transporter 3 isoform X1

      See identical proteins and their annotated locations for XP_002887801.1

      UniProtKB/TrEMBL
      D7KWL5
      Conserved Domains (2) summary
      pfam03092
      Location:61 → 473
      BT1; BT1 family
      cl21472
      Location:66 → 460
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...

    2. XM_021033964.1 → XP_020889623.1  probable folate-biopterin transporter 3 isoform X2

      Conserved Domains (1) summary
      pfam03092
      Location:61 → 397
      BT1; BT1 family

    RNA

    1. XR_002333730.1 RNA Sequence

    2. XR_002333728.1 RNA Sequence

    3. XR_002333729.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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