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    LOC9327498 glutamine synthetase cytosolic isozyme 1-5 [ Arabidopsis lyrata subsp. lyrata ]

    Gene ID: 9327498, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC9327498
    Gene description
    glutamine synthetase cytosolic isozyme 1-5
    Locus tag
    ARALYDRAFT_891668
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    See LOC9327498 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302555.1 (24621801..24624413)

    NW_003302555.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110224959 Neighboring gene uncharacterized LOC9327497 Neighboring gene probable inactive receptor kinase At1g48480 Neighboring gene probable serine/threonine protein kinase IRE3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003302555 Unplaced Scaffold Reference v.1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables glutamine synthetase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in glutamine biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glutamine synthetase cytosolic isozyme 1-5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference v.1.0 Primary Assembly

    Genomic

    1. NW_003302555.1 Reference v.1.0 Primary Assembly

      Range
      24621801..24624413
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002891390.2 → XP_002891436.1  glutamine synthetase cytosolic isozyme 1-5

      See identical proteins and their annotated locations for XP_002891436.1

      UniProtKB/TrEMBL
      D7KD18
      Conserved Domains (3) summary
      PLN02284
      Location:16 → 353
      PLN02284; glutamine synthetase
      pfam00120
      Location:124 → 348
      Gln-synt_C; Glutamine synthetase, catalytic domain
      pfam03951
      Location:22 → 97
      Gln-synt_N; Glutamine synthetase, beta-Grasp domain
    Nucleotide Protein
    Heading Accession and Version

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