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    LOC109357556 ribonuclease 3-like [ Lupinus angustifolius (narrow-leaved blue lupine) ]

    Gene ID: 109357556, updated on 1-Feb-2024

    Summary

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    Gene symbol
    LOC109357556
    Gene description
    ribonuclease 3-like
    Locus tag
    TanjilG_08646
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Lupinus angustifolius
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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    Genomic context

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    See LOC109357556 in Genome Data Viewer
    Location:
    chromosome: LG09
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    100 current LupAngTanjil_v1.0 (GCF_001865875.1) LG09 NC_032017.1 (14224710..14227100)

    Chromosome LG09 - NC_032017.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109355920 Neighboring gene pentatricopeptide repeat-containing protein At2g02980, chloroplastic Neighboring gene extracellular ribonuclease LE Neighboring gene beta-1,3-galactosyltransferase GALT1-like Neighboring gene E3 ubiquitin-protein ligase RNF181-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_032017.1 Chromosome LG09 Reference LupAngTanjil_v1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Transcriptome sequencing of different narrow-leafed lupin tissue types provides a comprehensive uni-gene assembly and extensive gene-based molecular markers. Kamphuis LG, et al. Plant Biotechnol J, 2015 Jan. PMID 25060816, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ribonuclease T2 activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in RNA catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ribonuclease 3-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Lupinus angustifolius Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference LupAngTanjil_v1.0

    Genomic

    1. NC_032017.1 Reference LupAngTanjil_v1.0

      Range
      14224710..14227100
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_019601567.1 → XP_019457112.1  ribonuclease 3-like

      UniProtKB/TrEMBL
      A0A4P1R8A8
    Nucleotide Protein
    Heading Accession and Version

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