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    LOC109363094 squamosa promoter-binding-like protein 11 [ Lupinus angustifolius (narrow-leaved blue lupine) ]

    Gene ID: 109363094, updated on 1-Feb-2024

    Summary

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    Gene symbol
    LOC109363094
    Gene description
    squamosa promoter-binding-like protein 11
    Locus tag
    TanjilG_21825
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Lupinus angustifolius
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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    Genomic context

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    See LOC109363094 in Genome Data Viewer
    Location:
    chromosome: LG12
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    100 current LupAngTanjil_v1.0 (GCF_001865875.1) LG12 NC_032020.1 (10761135..10775851, complement)

    Chromosome LG12 - NC_032020.1Genomic Context describing neighboring genes Neighboring gene probable methyltransferase At1g27930 Neighboring gene ranBP2-type zinc finger protein At1g67325-like Neighboring gene glutamate-rich WD repeat-containing protein 1 Neighboring gene F-box only protein 6-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_032020.1 Chromosome LG12 Reference LupAngTanjil_v1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    squamosa promoter-binding-like protein 11

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Lupinus angustifolius Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference LupAngTanjil_v1.0

    Genomic

    1. NC_032020.1 Reference LupAngTanjil_v1.0

      Range
      10761135..10775851 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_019609276.1 → XP_019464821.1  squamosa promoter-binding-like protein 11

      UniProtKB/TrEMBL
      A0A1J7H272

    2. XM_019609275.1 → XP_019464820.1  squamosa promoter-binding-like protein 11

      UniProtKB/TrEMBL
      A0A1J7H272

    3. XM_019609277.1 → XP_019464822.1  squamosa promoter-binding-like protein 11

      UniProtKB/TrEMBL
      A0A1J7H272
    Nucleotide Protein
    Heading Accession and Version

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