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    QWRF8 QWRF motif protein (DUF566) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829194, updated on 18-Sep-2024

    Summary

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    Official Symbol
    QWRF8
    Official Full Name
    QWRF motif protein (DUF566)
    Primary source
    TAIR:AT4G30710
    Locus tag
    AT4G30710
    See related
    Araport:AT4G30710
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AUG8; augmin subunit 8; QWRF domain containing 8; T10C21.60; T10C21_60
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    Genomic context

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    See QWRF8 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    8
    Sequence:
    Chromosome: 4; NC_003075.7 (14965143..14969763, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Translation initiation factor 3 protein Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene FAD/NAD(P)-binding oxidoreductase family protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Mitotic Function of Augmin Is Dependent on Its Microtubule-Associated Protein Subunit EDE1 in Arabidopsis thaliana. Lee YJ, et al. Curr Biol, 2017 Dec 18. PMID 29225022
    2. Characterization of the Arabidopsis augmin complex uncovers its critical function in the assembly of the acentrosomal spindle and phragmoplast microtubule arrays. Hotta T, et al. Plant Cell, 2012 Apr. PMID 22505726, Free PMC Article
    3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001342017.1
    NM_001342018.1
    NM_119217.3
    NM_202913.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    QWRF motif protein (DUF566)
    NP_194800.1
    • Family of unknown function (DUF566); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF566 (InterPro:IPR007573); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF566) (TAIR:AT2G24070.2); Has 9171 Blast hits to 3934 proteins in 412 species: Archae - 0; Bacteria - 1377; Metazoa - 2513; Fungi - 1393; Plants - 533; Viruses - 49; Other Eukaryotes - 3306 (source: NCBI BLink).
    NP_974642.1
    • Family of unknown function (DUF566); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF566 (InterPro:IPR007573); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF566) (TAIR:AT2G24070.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      14965143..14969763 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119217.3 → NP_194800.1  QWRF motif protein (DUF566) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194800.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JQE1, Q9SUH5
      UniProtKB/TrEMBL
      A0A5S9XY92, A0A654FUC7
      Conserved Domains (2) summary
      PHA03307
      Location:127 → 391
      PHA03307; transcriptional regulator ICP4; Provisional
      pfam04484
      Location:305 → 593
      QWRF; QWRF family

    2. NM_001342017.1 → NP_001329921.1  QWRF motif protein (DUF566) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JQE1, Q9SUH5
      UniProtKB/TrEMBL
      A0A5S9XY92, A0A654FUC7
      Conserved Domains (2) summary
      PHA03307
      Location:127 → 391
      PHA03307; transcriptional regulator ICP4; Provisional
      pfam04484
      Location:305 → 593
      QWRF; QWRF family

    3. NM_001342018.1 → NP_001329922.1  QWRF motif protein (DUF566) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V0V1, A0A1P8B957
      Conserved Domains (2) summary
      PHA03307
      Location:127 → 391
      PHA03307; transcriptional regulator ICP4; Provisional
      pfam04484
      Location:305 → 593
      QWRF; QWRF family

    4. NM_202913.1 → NP_974642.1  QWRF motif protein (DUF566) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974642.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FUC7
      Conserved Domains (1) summary
      pfam04484
      Location:287 → 593
      DUF566; Family of unknown function (DUF566)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SUH5.1

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