TOE2 target of early activation tagged (EAT) 2 [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Symbol: TOE2
Official Full Name: target of early activation tagged (EAT) 2
Primary source: TAIR:AT5G60120
Locus tag: AT5G60120
See related: Araport:AT5G60120
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: MGO3.10; MGO3_10; target of early activation tagged (EAT) 2
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Genomic context

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See TOE2 in Genome Data Viewer

Location:: chromosome: 5

Exon count:: 8

Sequence:: Chromosome: 5; NC_003076.8 (24207689..24211743)

Chromosome 5 - NC_003076.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

MiR172b-TOE1/2 module regulates plant innate immunity in an age-dependent manner.
Title: MiR172b-TOE1/2 module regulates plant innate immunity in an age-dependent manner.

Submit: New GeneRIF Correction

Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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NM_125405.4

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables DNA-binding transcription factor activity	IEA Inferred from Electronic Annotation more info
enables DNA-binding transcription factor activity	ISS Inferred from Sequence or Structural Similarity more info	PubMed
enables identical protein binding	IPI Inferred from Physical Interaction more info	PubMed
enables protein binding	IPI Inferred from Physical Interaction more info	PubMed
enables transcription cis-regulatory region binding	IPI Inferred from Physical Interaction more info	PubMed
enables transcription corepressor binding	IPI Inferred from Physical Interaction more info	PubMed

Process	Evidence Code	Pubs
acts_upstream_of_or_within negative regulation of gene expression	IGI Inferred from Genetic Interaction more info	PubMed
acts_upstream_of_or_within negative regulation of innate immune response	IGI Inferred from Genetic Interaction more info	PubMed
involved_in regulation of DNA-templated transcription	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in nucleus	ISM Inferred from Sequence Model more info

General protein information

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Preferred Names: target of early activation tagged (EAT) 2

NP_001190576.1

target of early activation tagged (EAT) 2 (TOE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2.7 (TAIR:AT2G28550.2).

NP_200820.3

target of early activation tagged (EAT) 2 (TOE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2.7 (TAIR:AT2G28550.1); Has 5042 Blast hits to 4634 proteins in 238 species: Archae - 0; Bacteria - 21; Metazoa - 0; Fungi - 0; Plants - 4961; Viruses - 7; Other Eukaryotes - 53 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003076.8 Reference assembly

Range

24207689..24211743

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_001345391.1 → NP_001331666.1 target of early activation tagged (EAT) 2 [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1P8BEK5
NM_001345390.1 → NP_001331668.1 target of early activation tagged (EAT) 2 [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1P8BEK5
NM_001345392.1 → NP_001331665.1 target of early activation tagged (EAT) 2 [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1P8BEK5
NM_001203647.1 → NP_001190576.1 target of early activation tagged (EAT) 2 [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_001190576.1

Status: REVIEWED

UniProtKB/TrEMBL

A0A5S9YFQ1, A0A654GDR3, F4JXG9

Conserved Domains (1) summary

smart00380
Location:160 → 222

AP2; DNA-binding domain in plant proteins such as APETALA2 and EREBPs
NM_001345393.1 → NP_001331667.1 target of early activation tagged (EAT) 2 [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1P8BEK0, A0A5S9YFQ1

Conserved Domains (1) summary

cl00033
Location:160 → 222

AP2; DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein). In EREBPs the domain specifically binds to the 11bp GCC box of the ethylene response element (ERE), a promotor ...
NM_125405.4 → NP_200820.3 target of early activation tagged (EAT) 2 [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_200820.3

Status: REVIEWED

UniProtKB/Swiss-Prot

Q9LVG2

UniProtKB/TrEMBL

A0A178USN8, A0A5S9YFQ1

Conserved Domains (1) summary

cl00033
Location:160 → 222

AP2; DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein). In EREBPs the domain specifically binds to the 11bp GCC box of the ethylene response element (ERE), a promotor ...