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    Ribosomal protein L31 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 6241018, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Ribosomal protein L31
    Primary source
    TAIR:AT5G55125
    Locus tag
    AT5G55125
    See related
    Araport:AT5G55125
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (22371991..22373209)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Stigma-specific Stig1 family protein Neighboring gene GDP-L-galactose phosphorylase VITAMIN C DEFECTIVE 5 (VTC5) Neighboring gene co-factor for nitrate, reductase and xanthine dehydrogenase 5 Neighboring gene Protein of unknown function (PD694200) Neighboring gene Defensin-like (DEFL) family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001125968.2
    NM_001125969.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in plastid HDA PubMed 

    General protein information

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    Preferred Names
    Ribosomal protein L31
    NP_001119440.1
    • Ribosomal protein L31; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein L31 (InterPro:IPR002150); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_001119441.1
    • Ribosomal protein L31; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein L31 (InterPro:IPR002150); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      22371991..22373209
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001125968.2 → NP_001119440.1  Ribosomal protein L31 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001119440.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UB48, A0MDV0, Q1G3G5
      Conserved Domains (1) summary
      cl00377
      Location:1 → 58
      Ribosomal_L31; Ribosomal protein L31

    2. NM_001125969.1 → NP_001119441.1  Ribosomal protein L31 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001119441.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UB48, A0MDV0, Q1G3G5
      Conserved Domains (1) summary
      cl00377
      Location:1 → 58
      Ribosomal_L31; Ribosomal protein L31
    Nucleotide Protein
    Heading Accession and Version

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