U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    Pre-rRNA-processing protein TSR2, conserved region [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832869, updated on 18-Sep-2024

    Summary

    Official Full Name
    Pre-rRNA-processing protein TSR2, conserved region
    Primary source
    TAIR:AT5G27990
    Locus tag
    AT5G27990
    See related
    Araport:AT5G27990
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F15F15.60; F15F15_60
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Location:
    chromosome: 5
    Exon count:
    6
    Sequence:
    Chromosome: 5; NC_003076.8 (10016662..10018526)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene ARM repeat superfamily protein Neighboring gene Seed maturation protein Neighboring gene Polyketide cyclase/dehydrase and lipid transport superfamily protein Neighboring gene Polyketide cyclase/dehydrase and lipid transport superfamily protein

    General protein information

    Preferred Names
    Pre-rRNA-processing protein TSR2, conserved region
    NP_001318666.1
    • Pre-rRNA-processing protein TSR2, conserved region; CONTAINS InterPro DOMAIN/s: Pre-rRNA-processing protein TSR2, conserved region (InterPro:IPR019398); BEST Arabidopsis thaliana protein match is: Pre-rRNA-processing protein TSR2, conserved region (TAIR:AT3G22510.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      10016662..10018526
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001344051.1NP_001318666.1  Pre-rRNA-processing protein TSR2, conserved region [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UHJ3, A0A5S9YA62, Q8L9R4
      Conserved Domains (1) summary
      pfam10273
      Location:1595
      WGG; Pre-rRNA-processing protein TSR2
    2. NM_122682.4NP_198151.1  Pre-rRNA-processing protein TSR2, conserved region [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_198151.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UHJ3, A0A5S9YA62, Q8L9R4
      Conserved Domains (1) summary
      pfam10273
      Location:1595
      WGG; Pre-rRNA-processing protein TSR2