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    PPPDE putative thiol peptidase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828673, updated on 18-Sep-2024

    Summary

    Official Full Name
    PPPDE putative thiol peptidase family protein
    Primary source
    TAIR:AT4G25680
    Locus tag
    AT4G25680
    See related
    Araport:AT4G25680
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    L73G19.60; L73G19_60
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    Genomic context

    Location:
    chromosome: 4
    Exon count:
    4
    Sequence:
    Chromosome: 4; NC_003075.7 (13087973..13090161)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene ACD1-like protein Neighboring gene PPPDE putative thiol peptidase family protein Neighboring gene stress response NST1-like protein Neighboring gene stress response NST1-like protein Neighboring gene beta-hydroxylase 1

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_118700.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables peptidase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    PPPDE putative thiol peptidase family protein
    NP_194298.1
    • PPPDE putative thiol peptidase family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT4G25660.1); Has 754 Blast hits to 754 proteins in 155 species: Archae - 0; Bacteria - 0; Metazoa - 207; Fungi - 56; Plants - 348; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      13087973..13090161
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118700.3NP_194298.1  PPPDE putative thiol peptidase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194298.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V7Y9, A0A7G2F0M9, Q9SZZ6
      Conserved Domains (1) summary
      pfam05903
      Location:2154
      Peptidase_C97; PPPDE putative peptidase domain