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    uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824166, updated on 18-Sep-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    TAIR:AT3G50040
    Locus tag
    AT3G50040
    See related
    Araport:AT3G50040
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    6
    Sequence:
    Chromosome: 3; NC_003074.8 (18549204..18551375, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Serine protease inhibitor, potato inhibitor I-type family protein Neighboring gene ARM-repeat/Tetratricopeptide repeat (TPR)-like protein Neighboring gene Eukaryotic aspartyl protease family protein Neighboring gene myb domain protein 77

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_114864.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_190573.2
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37440.2); Has 70 Blast hits to 70 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      18549204..18551375 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001339452.1 → NP_001326235.1  uncharacterized protein AT3G50040 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VNL7, A0A5S9XJL6, Q147P4

    2. NM_001339451.1 → NP_001326236.1  uncharacterized protein AT3G50040 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VNL7, A0A1I9LNN2, A0A5S9XJL6

    3. NM_001339450.1 → NP_001326237.1  uncharacterized protein AT3G50040 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VNL7, A0A5S9XJL6, Q147P4

    4. NM_114864.4 → NP_190573.2  uncharacterized protein AT3G50040 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190573.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VNL7, A0A5S9XJL6, Q147P4
      Conserved Domains (1) summary
      cd11650
      Location:29 → 283
      AT4G37440_like; Uncharacterized protein domain conserved in plants
    Nucleotide Protein
    Heading Accession and Version

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