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    CM1 chorismate mutase 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822573, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CM1
    Official Full Name
    chorismate mutase 1
    Primary source
    TAIR:AT3G29200
    Locus tag
    AT3G29200
    See related
    Araport:AT3G29200
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS THALIANA CHORISMATE MUTASE 1; ATCM1; chorismate mutase 1
    Summary
    L-ascorbate peroxidase
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    Genomic context

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    See CM1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    6
    Sequence:
    Chromosome: 3; NC_003074.8 (11163839..11166458, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene Terpenoid cyclases/Protein prenyltransferases superfamily protein Neighboring gene pseudo Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative large scale characterization of plant versus mammal proteins reveals similar and idiosyncratic N-α-acetylation features. Bienvenut WV, et al. Mol Cell Proteomics, 2012 Jun. PMID 22223895, Free PMC Article
    2. From sequence analysis of three novel ascorbate peroxidases from Arabidopsis thaliana to structure, function and evolution of seven types of ascorbate peroxidase. Jespersen HM, et al. Biochem J, 1997 Sep 1. PMID 9291097, Free PMC Article
    3. Structural evolution of differential amino acid effector regulation in plant chorismate mutases. Westfall CS, et al. J Biol Chem, 2014 Oct 10. PMID 25160622, Free PMC Article
    4. Identification, characterization and comparative analysis of a novel chorismate mutase gene in Arabidopsis thaliana. Mobley EM, et al. Gene, 1999 Nov 15. PMID 10564818
    5. Cloning and expression in yeast of a higher plant chorismate mutase. Molecular cloning, sequencing of the cDNA and characterization of the Arabidopsis thaliana enzyme expressed in yeast. Eberhard J, et al. FEBS Lett, 1993 Nov 15. PMID 8224252

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Structural evolution of differential amino acid effector regulation was found in 3 chorismate mutase isoforms.
      Title: Structural evolution of differential amino acid effector regulation in plant chorismate mutases.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    General gene information

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    NM_113844.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables L-ascorbate peroxidase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables chorismate mutase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables chorismate mutase activity IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    enables protein homodimerization activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in aromatic amino acid family biosynthetic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within aromatic amino acid family biosynthetic process TAS
    Traceable Author Statement
    more info
    		 PubMed 
    acts_upstream_of_or_within cellular oxidant detoxification ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    involved_in chorismate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in prephenate(2-) biosynthetic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in chloroplast RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    located_in cytosol TAS
    Traceable Author Statement
    more info
    		 PubMed 
    located_in plastid TAS
    Traceable Author Statement
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    chorismate mutase 1
    NP_566846.1
    • chorismate mutase 1 (CM1); CONTAINS InterPro DOMAIN/s: Chorismate mutase, type II (InterPro:IPR020822), Chorismate mutase, AroQ class, eukaryotic type (InterPro:IPR008238); BEST Arabidopsis thaliana protein match is: chorismate mutase 3 (TAIR:AT1G69370.1); Has 278 Blast hits to 278 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 142; Plants - 118; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      11163839..11166458 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113844.4 → NP_566846.1  chorismate mutase 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566846.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P42738, Q29Q24, Q9LS75, Q9SUJ5
      UniProtKB/TrEMBL
      A0A178VAF2, A0A5S9XGQ0
      Conserved Domains (1) summary
      PLN02344
      Location:50 → 340
      PLN02344; chorismate mutase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P42738.3

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