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    VAMP728 vesicle-associated membrane protein 728 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822087, updated on 18-Sep-2024

    Summary

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    Official Symbol
    VAMP728
    Official Full Name
    vesicle-associated membrane protein 728
    Primary source
    TAIR:AT3G24890
    Locus tag
    AT3G24890
    See related
    Araport:AT3G24890
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATVAMP728; vesicle-associated membrane protein 728
    Summary
    member of VAMP72 Gene Family
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    Genomic context

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    See VAMP728 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    5
    Sequence:
    Chromosome: 3; NC_003074.8 (9097391..9099073)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Helicase/SANT-associated, DNA binding protein Neighboring gene ncRNA Neighboring gene Helicase/SANT-associated, DNA binding protein Neighboring gene receptor like protein 39 Neighboring gene ncRNA Neighboring gene miscRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001203037.1
    NM_001338720.1
    NM_001338721.1
    NM_001338722.1
    NM_113401.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    vesicle-associated membrane protein 728
    NP_001189966.1
    • vesicle-associated membrane protein 728 (VAMP728); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vesicle-mediated transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: vesicle-associated membrane protein 726 (TAIR:AT1G04760.1).
    NP_189133.4
    • vesicle-associated membrane protein 728 (VAMP728); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vesicle-mediated transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: vesicle-associated membrane protein 726 (TAIR:AT1G04760.1); Has 286 Blast hits to 285 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 279; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      9097391..9099073
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113401.5 → NP_189133.4  vesicle-associated membrane protein 728 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189133.4

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q6AWV9
      Conserved Domains (1) summary
      cd15843
      Location:31 → 65
      R-SNARE; SNARE motif, subgroup R-SNARE

    2. NM_001338720.1 → NP_001326706.1  vesicle-associated membrane protein 728 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q6AWV9

    3. NM_001338721.1 → NP_001326704.1  vesicle-associated membrane protein 728 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q6AWV9

    4. NM_001203037.1 → NP_001189966.1  vesicle-associated membrane protein 728 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001189966.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4J7T4
      Conserved Domains (2) summary
      pfam00957
      Location:28 → 107
      Synaptobrevin; Synaptobrevin
      cl22856
      Location:30 → 100
      SNARE; SNARE motif

    5. NM_001338722.1 → NP_001326705.1  vesicle-associated membrane protein 728 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q6AWV9
    Nucleotide Protein
    Heading Accession and Version

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