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    EMB3120 uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820719, updated on 18-Sep-2024

    Summary

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    Official Symbol
    EMB3120
    Official Full Name
    uncharacterized protein
    Primary source
    TAIR:AT3G14900
    Locus tag
    AT3G14900
    See related
    Araport:AT3G14900
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    EMBRYO DEFECTIVE 3120
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    Genomic context

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    See EMB3120 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (5013291..5015342, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene transcription factor-like protein Neighboring gene phosphoesterase Neighboring gene Rab3 GTPase-activating protein non-catalytic subunit Neighboring gene Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein Neighboring gene Uroporphyrinogen decarboxylase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Crucial role of SWL1 in chloroplast biogenesis and development in Arabidopsis thaliana. Wang Y, et al. Plant Cell Rep, 2024 May 5. PMID 38704787
    2. Assembly of an interactive correlation network for the Arabidopsis genome using a novel heuristic clustering algorithm. Mutwil M, et al. Plant Physiol, 2010 Jan. PMID 19889879, Free PMC Article
    3. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article
    4. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Crucial role of SWL1 in chloroplast biogenesis and development in Arabidopsis thaliana.
      Title: Crucial role of SWL1 in chloroplast biogenesis and development in Arabidopsis thaliana.
    Submit: New GeneRIF Correction

    General gene information

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    NM_112352.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within embryo development ending in seed dormancy IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_188108.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 17135 Blast hits to 10204 proteins in 644 species: Archae - 47; Bacteria - 1684; Metazoa - 5536; Fungi - 2506; Plants - 1043; Viruses - 361; Other Eukaryotes - 5958 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      5013291..5015342 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112352.4 → NP_188108.1  uncharacterized protein AT3G14900 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188108.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V8N6, A0A654F794, Q9LKB4
    Nucleotide Protein
    Heading Accession and Version

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