U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    ATSIK Protein kinase superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820023, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    ATSIK
    Official Full Name
    Protein kinase superfamily protein
    Primary source
    TAIR:AT3G08760
    Locus tag
    AT3G08760
    See related
    Araport:AT3G08760
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Summary
    Encodes an osmotic stress-inducible kinase that functions as a negative regulator of osmotic stress signaling in plants.
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See ATSIK in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    4
    Sequence:
    Chromosome: 3; NC_003074.8 (2657838..2661095, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene elongation factor P (EF-P) family protein Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene lipid transfer protein 6 Neighboring gene BRISC complex subunit Abro1-like protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help
    NM_001337770.1
    NM_111710.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within phosphorylation ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    Protein kinase superfamily protein
    NP_187488.1
    • ATSIK; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G15080.1); Has 42849 Blast hits to 42385 proteins in 1619 species: Archae - 20; Bacteria - 2695; Metazoa - 11858; Fungi - 1356; Plants - 23776; Viruses - 143; Other Eukaryotes - 3001 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      2657838..2661095 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001337769.1 → NP_001327496.1  Protein kinase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VK25, A0A384KX76, A0A654F6P9, Q9C9Y3
      Conserved Domains (1) summary
      cl21453
      Location:222 → 452
      PKc_like; Protein Kinases, catalytic domain

    2. NM_111710.5 → NP_187488.1  Protein kinase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187488.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VK25, A0A384KX76, A0A654F6P9, Q9C9Y3
      Conserved Domains (1) summary
      cl21453
      Location:222 → 452
      PKc_like; Protein Kinases, catalytic domain

    3. NM_001337770.1 → NP_001327495.1  Protein kinase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VK25, A0A384KX76, A0A654F6P9, Q9C9Y3
      Conserved Domains (1) summary
      cl21453
      Location:222 → 452
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools