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    DNA-binding storekeeper protein-related transcriptional regulator [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818207, updated on 18-Sep-2024

    Summary

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    Official Full Name
    DNA-binding storekeeper protein-related transcriptional regulator
    Primary source
    TAIR:AT2G36340
    Locus tag
    AT2G36340
    See related
    Araport:AT2G36340
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F2H17.5; F2H17_5
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    5
    Sequence:
    Chromosome: 2; NC_003071.7 (15235487..15237904)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene A20/AN1-like zinc finger family protein Neighboring gene GDSL-like Lipase/Acylhydrolase superfamily protein Neighboring gene Uncharacterized protein family (UPF0497) Neighboring gene Protein kinase superfamily protein Neighboring gene RAB6-interacting golgin (DUF662) Neighboring gene Galactose oxidase/kelch repeat superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. GeBP and GeBP-like proteins are noncanonical leucine-zipper transcription factors that regulate cytokinin response in Arabidopsis. Chevalier F, et al. Plant Physiol, 2008 Mar. PMID 18162594, Free PMC Article
    2. STOREKEEPER RELATED1/G-Element Binding Protein (STKR1) Interacts with Protein Kinase SnRK1. Nietzsche M, et al. Plant Physiol, 2018 Feb. PMID 29192025, Free PMC Article
    3. GeBP, the first member of a new gene family in Arabidopsis, encodes a nuclear protein with DNA-binding activity and is regulated by KNAT1. Curaba J, et al. Plant J, 2003 Jan. PMID 12535344
    4. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
    5. CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping. Wanamaker SA, et al. Nat Methods, 2017 Aug. PMID 28650476, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_129191.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within regulation of DNA-templated transcription TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    DNA-binding storekeeper protein-related transcriptional regulator
    NP_181175.1
    • DNA-binding storekeeper protein-related transcriptional regulator; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT2G25650.1); Has 3752 Blast hits to 2505 proteins in 289 species: Archae - 18; Bacteria - 210; Metazoa - 937; Fungi - 323; Plants - 271; Viruses - 164; Other Eukaryotes - 1829 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      15235487..15237904
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129191.4 → NP_181175.1  DNA-binding storekeeper protein-related transcriptional regulator [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_181175.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q6RF62, Q6RF63, Q9SJM4
      UniProtKB/TrEMBL
      A0A178VUJ8, A0A5S9X4F2, A0A654EZF2
      Conserved Domains (2) summary
      COG5271
      Location:161 → 388
      MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
      pfam04504
      Location:63 → 152
      DUF573; Protein of unknown function, DUF573
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SJM4.1

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