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    Ubiquitin-conjugating enzyme family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816375, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Ubiquitin-conjugating enzyme family protein
    Primary source
    TAIR:AT2G18600
    Locus tag
    AT2G18600
    See related
    Araport:AT2G18600
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F24H14.5; F24H14_5
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    6
    Sequence:
    Chromosome: 2; NC_003071.7 (8073167..8075009, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene Major facilitator superfamily protein Neighboring gene Terpenoid synthases superfamily protein Neighboring gene transmembrane protein, putative (DUF677)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_127416.4

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    involved_in protein neddylation IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Ubiquitin-conjugating enzyme family protein
    NP_565440.1
    • Ubiquitin-conjugating enzyme family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, small conjugating protein ligase activity, acid-amino acid ligase activity, ATP binding; INVOLVED IN: regulation of protein metabolic process, protein modification process, post-translational protein modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), RUB1 conjugating enzyme Ubc12 (InterPro:IPR015580); BEST Arabidopsis thaliana protein match is: RUB1 conjugating enzyme 1 (TAIR:AT4G36800.2); Has 8339 Blast hits to 8336 proteins in 387 species: Archae - 0; Bacteria - 2; Metazoa - 3796; Fungi - 1734; Plants - 1481; Viruses - 20; Other Eukaryotes - 1306 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      8073167..8075009 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001335600.1 → NP_001324430.1  Ubiquitin-conjugating enzyme family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9ZU75
      UniProtKB/TrEMBL
      A0A178VNF5, A0A5S9WZ23, A0A654EU03
      Conserved Domains (1) summary
      pfam00179
      Location:35 → 171
      UQ_con; Ubiquitin-conjugating enzyme

    2. NM_127416.4 → NP_565440.1  Ubiquitin-conjugating enzyme family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565440.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9ZU75
      UniProtKB/TrEMBL
      A0A178VNF5, A0A5S9WZ23, A0A654EU03
      Conserved Domains (1) summary
      pfam00179
      Location:35 → 171
      UQ_con; Ubiquitin-conjugating enzyme
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9ZU75.1

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