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    Single hybrid motif superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843930, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Single hybrid motif superfamily protein
    Primary source
    TAIR:AT1G75980
    Locus tag
    AT1G75980
    See related
    Araport:AT1G75980
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T4O12.20; T4O12_20
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    6
    Sequence:
    Chromosome: 1; NC_003070.9 (28522554..28524418, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene AMP-dependent synthetase and ligase family protein Neighboring gene tRNA-Glu Neighboring gene PAM domain (PCI/PINT associated module) protein Neighboring gene tRNA-Asp Neighboring gene Alba DNA/RNA-binding protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001334703.1
    NM_106247.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Single hybrid motif superfamily protein
    NP_177725.1
    • Single hybrid motif superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: glycine catabolic process; LOCATED IN: mitochondrion, glycine cleavage complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Single hybrid motif (InterPro:IPR011053), Glycine cleavage H-protein (InterPro:IPR002930); Has 205 Blast hits to 205 proteins in 102 species: Archae - 6; Bacteria - 8; Metazoa - 118; Fungi - 2; Plants - 34; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      28522554..28524418 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106247.4 → NP_177725.1  Single hybrid motif superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177725.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W5D9, A0A7G2E4V7, A0JQ11
      Conserved Domains (1) summary
      cl11404
      Location:89 → 220
      Biotinyl_lipoyl_domains; Biotinyl_lipoyl_domains are present in biotin-dependent carboxylases/decarboxylases, the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases, and the H-protein of the glycine cleavage system (GCS). These domains transport CO2, acyl, ...

    2. NM_001334703.1 → NP_001322966.1  Single hybrid motif superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AVM1
    Nucleotide Protein
    Heading Accession and Version

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