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    ARR11 response regulator 11 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843096, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ARR11
    Official Full Name
    response regulator 11
    Primary source
    TAIR:AT1G67710
    Locus tag
    AT1G67710
    See related
    Araport:AT1G67710
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F12A21.15; F12A21_15; response regulator 11
    Summary
    Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.
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    Genomic context

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    See ARR11 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (25376679..25379217, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Zincin-like metalloproteases family protein Neighboring gene multidrug resistance protein Neighboring gene ncRNA Neighboring gene Leucine-rich repeat protein kinase family protein Neighboring gene beta-ketoacyl reductase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. In vivo and in vitro characterization of the ARR11 response regulator implicated in the His-to-Asp phosphorelay signal transduction in Arabidopsis thaliana. Imamura A, et al. Plant Cell Physiol, 2003 Feb. PMID 12610214
    2. Genome-wide association study reveals novel players in defense hormone crosstalk in Arabidopsis. Proietti S, et al. Plant Cell Environ, 2018 Oct. PMID 29852537, Free PMC Article
    3. Multiple type-B response regulators mediate cytokinin signal transduction in Arabidopsis. Mason MG, et al. Plant Cell, 2005 Nov. PMID 16227453, Free PMC Article
    4. Functional characterization of type-B response regulators in the Arabidopsis cytokinin response. Hill K, et al. Plant Physiol, 2013 May. PMID 23482873, Free PMC Article
    5. Analysis of protein interactions within the cytokinin-signaling pathway of Arabidopsis thaliana. Dortay H, et al. FEBS J, 2006 Oct. PMID 16965536

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001334321.1
    NM_001334322.1
    NM_105439.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA-binding transcription factor activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables phosphorelay response regulator activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytokinin-activated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within cytokinin-activated signaling pathway TAS
    Traceable Author Statement
    more info
    		 PubMed 
    involved_in phosphorelay signal transduction system IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within regulation of abscisic acid-activated signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within regulation of jasmonic acid mediated signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within regulation of root meristem growth IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in regulation of root meristem growth IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within regulation of salicylic acid mediated signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to cytokinin IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    response regulator 11
    NP_176938.1
    • response regulator 11 (ARR11); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 1 (TAIR:AT3G16857.1); Has 111784 Blast hits to 110359 proteins in 3115 species: Archae - 722; Bacteria - 99003; Metazoa - 40; Fungi - 775; Plants - 2897; Viruses - 3; Other Eukaryotes - 8344 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      25376679..25379217 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105439.3 → NP_176938.1  response regulator 11 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176938.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O81712, Q9FXD6, Q9MAY2
      UniProtKB/TrEMBL
      A0A178W3B6, Q0WRT0
      Conserved Domains (2) summary
      TIGR01557
      Location:194 → 247
      myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class
      cd00156
      Location:14 → 127
      REC; Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems; ...

    2. NM_001334322.1 → NP_001320474.1  response regulator 11 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W3B6, A0A1P8AMW7

    3. NM_001334321.1 → NP_001320475.1  response regulator 11 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W3B6, A0A1P8AMX5
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FXD6.1

    Gene LinkOut

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