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    UDP-Glycosyltransferase superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843878, updated on 18-Sep-2024

    Summary

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    Official Full Name
    UDP-Glycosyltransferase superfamily protein
    Primary source
    TAIR:AT1G75420
    Locus tag
    AT1G75420
    See related
    Araport:AT1G75420
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F1B16.5; F1B16_5
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (28305218..28307548)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene RING/U-box superfamily protein Neighboring gene BEL1-like homeodomain 3 Neighboring gene BEL1-like homeodomain 11 Neighboring gene ncRNA Neighboring gene ubiquitin-conjugating enzyme 16 Neighboring gene cytokinin oxidase 5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis G-protein interactome reveals connections to cell wall carbohydrates and morphogenesis. Klopffleisch K, et al. Mol Syst Biol, 2011 Sep 27. PMID 21952135, Free PMC Article
    2. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001334688.1
    NM_106196.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus HDA PubMed 
    located_in endosome HDA PubMed 
    located_in trans-Golgi network HDA PubMed 

    General protein information

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    Preferred Names
    UDP-Glycosyltransferase superfamily protein
    NP_177675.1
    • UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G19710.1); Has 7008 Blast hits to 7002 proteins in 1487 species: Archae - 264; Bacteria - 4740; Metazoa - 98; Fungi - 57; Plants - 126; Viruses - 0; Other Eukaryotes - 1723 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      28305218..28307548
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001334687.1 → NP_001320304.1  UDP-Glycosyltransferase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WJA8, A0A1P8AMF3, A0A384KQD5, Q9FWT0
      Conserved Domains (2) summary
      cd03801
      Location:1 → 366
      GT4_PimA-like; phosphatidyl-myo-inositol mannosyltransferase
      pfam16994
      Location:1 → 159
      Glyco_trans_4_5; Glycosyl-transferase family 4

    2. NM_106196.4 → NP_177675.1  UDP-Glycosyltransferase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177675.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WH91, A0A5S9WUL4, Q7Y217
      Conserved Domains (3) summary
      COG0438
      Location:260 → 455
      RfaB; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
      pfam16994
      Location:65 → 244
      Glyco_trans_4_5; Glycosyl-transferase family 4
      cl10013
      Location:96 → 451
      Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...

    3. NM_001334688.1 → NP_001320303.1  UDP-Glycosyltransferase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WH91, A0A1P8AMC6, A0A5S9WUL4, A0A7G2E4S6
      Conserved Domains (2) summary
      cd03801
      Location:70 → 425
      GT4_PimA-like; phosphatidyl-myo-inositol mannosyltransferase
      pfam16994
      Location:39 → 218
      Glyco_trans_4_5; Glycosyl-transferase family 4
    Nucleotide Protein
    Heading Accession and Version

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