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    N-lysine methyltransferase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 840483, updated on 18-Sep-2024

    Summary

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    Official Full Name
    N-lysine methyltransferase
    Primary source
    TAIR:AT1G35780
    Locus tag
    AT1G35780
    See related
    Araport:AT1G35780
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F14D7.8; F14D7_8
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (13277259..13280387, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene pseudo Neighboring gene miscRNA Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics. Kim TW, et al. Plant Cell, 2023 Mar 15. PMID 36660928, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001333167.1
    NM_001333168.1
    NM_001333169.1
    NM_103280.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    N-lysine methyltransferase
    NP_564463.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78150.2); Has 145 Blast hits to 144 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      13277259..13280387 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103280.5 → NP_564463.1  N-lysine methyltransferase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564463.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654EFG8, Q9LP18
      Conserved Domains (1) summary
      pfam13266
      Location:3 → 284
      DUF4057; Protein of unknown function (DUF4057)

    2. NM_001333167.1 → NP_001320217.1  N-lysine methyltransferase [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WNI2, A0A1P8AM51

    3. NM_001333168.1 → NP_001320216.1  N-lysine methyltransferase [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WNI2, A0A1P8AM51

    4. NM_001333169.1 → NP_001320215.1  N-lysine methyltransferase [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WNI2, A0A1P8AM51
    Nucleotide Protein
    Heading Accession and Version

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