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    LURP-one-like protein (DUF567) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841827, updated on 18-Sep-2024

    Summary

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    Official Full Name
    LURP-one-like protein (DUF567)
    Primary source
    TAIR:AT1G53890
    Locus tag
    AT1G53890
    See related
    Araport:AT1G53890
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T18A20.12
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (20124706..20126525)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene linoleate 9S-lipoxygenase-4 protein, putative (DUF581) Neighboring gene uncharacterized protein Neighboring gene Eukaryotic translation initiation factor 2B (eIF-2B) family protein Neighboring gene linoleate 9S-lipoxygenase-4 protein, putative (DUF581)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001036107.3
    NM_001198289.1
    NM_001333617.1
    NM_001333618.1
    NM_104267.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    LURP-one-like protein (DUF567)
    NP_001031184.1
    • Protein of unknown function (DUF567); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT1G53870.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_001185218.2
    • Protein of unknown function (DUF567); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT1G53870.2).
    NP_001319217.1
    • Protein of unknown function (DUF567); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT1G53870.1); Has 264 Blast hits to 263 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 264; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      20124706..20126525
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001036107.3 → NP_001031184.1  LURP-one-like protein (DUF567) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031184.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W592
      Conserved Domains (1) summary
      pfam04525
      Location:30 → 194
      LOR; LURP-one-related

    2. NM_104267.2 → NP_564645.1  LURP-one-like protein (DUF567) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564645.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q67XV7, Q682D7, Q682U5, Q8LG32, Q9S7P7
      UniProtKB/TrEMBL
      A0A178W592
      Conserved Domains (1) summary
      pfam04525
      Location:30 → 209
      LOR; LURP-one-related

    3. NM_001333617.1 → NP_001319217.1  LURP-one-like protein (DUF567) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q67XV7, Q682D7, Q682U5, Q8LG32, Q9S7P7
      UniProtKB/TrEMBL
      A0A178W592

    4. NM_001333618.1 → NP_001320314.1  LURP-one-like protein (DUF567) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W592

    5. NM_001198289.1 → NP_001185218.2  LURP-one-like protein (DUF567) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W592, F4HTE5
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q67XV7.2
    Q8LG32.2

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