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    uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838757, updated on 18-Sep-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    TAIR:AT1G21560
    Locus tag
    AT1G21560
    See related
    Araport:AT1G21560
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F24J8.19; F24J8_19
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (7554671..7557112)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene AMP-dependent synthetase and ligase family protein Neighboring gene Calcium-binding EF-hand family protein Neighboring gene Zinc finger C-x8-C-x5-C-x3-H type family protein Neighboring gene kinase with adenine nucleotide alpha hydrolases-like domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Proteome-wide screens for small ubiquitin-like modifier (SUMO) substrates identify Arabidopsis proteins implicated in diverse biological processes. Elrouby N, et al. Proc Natl Acad Sci U S A, 2010 Oct 5. PMID 20855607, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_102005.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_001185053.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01170.1).
    NP_001185054.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01170.1).
    NP_173575.2
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01170.1); Has 76 Blast hits to 76 proteins in 15 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 2; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      7554671..7557112
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001198125.2 → NP_001185054.1  uncharacterized protein AT1G21560 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001185054.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W9D5, A0A384LKJ3, A0A5S9VHW8, Q9LPK4

    2. NM_001198124.2 → NP_001185053.1  uncharacterized protein AT1G21560 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001185053.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W9D5, A0A384LKJ3, A0A5S9VHW8, Q9LPK4

    3. NM_001332509.1 → NP_001323280.1  uncharacterized protein AT1G21560 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AWJ6, A0A5S9VHW8

    4. NM_001332510.1 → NP_001323281.1  uncharacterized protein AT1G21560 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W9D5, A0A384LKJ3, A0A5S9VHW8, Q9LPK4

    5. NM_001332511.1 → NP_001323279.1  uncharacterized protein AT1G21560 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W9D5, A0A384LKJ3, A0A5S9VHW8, Q9LPK4

    6. NM_102005.3 → NP_173575.2  uncharacterized protein AT1G21560 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173575.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9VHW8, Q681X9
    Nucleotide Protein
    Heading Accession and Version

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