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    Cupredoxin superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838705, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Cupredoxin superfamily protein
    Primary source
    TAIR:AT1G21090
    Locus tag
    AT1G21090
    See related
    Araport:AT1G21090
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T22I11.8; T22I11_8
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (7384560..7386580)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Nucleotide-sugar transporter family protein Neighboring gene DNAJ heat shock N-terminal domain-containing protein Neighboring gene O-methyltransferase family protein Neighboring gene O-methyltransferase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A proteomic and genomic analysis. Borner GH, et al. Plant Physiol, 2003 Jun. PMID 12805588, Free PMC Article
    2. Prediction of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A genomic analysis. Borner GH, et al. Plant Physiol, 2002 Jun. PMID 12068095, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001332484.1
    NM_101963.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in membrane TAS
    Traceable Author Statement
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Cupredoxin superfamily protein
    NP_564135.1
    • Cupredoxin superfamily protein; CONTAINS InterPro DOMAIN/s: Cupredoxin (InterPro:IPR008972); Has 232 Blast hits to 228 proteins in 41 species: Archae - 0; Bacteria - 4; Metazoa - 16; Fungi - 9; Plants - 195; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      7384560..7386580
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101963.4 → NP_564135.1  Cupredoxin superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564135.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9VCR6, A0A654EMI1, A0A7G2DWB4, Q0V805
      Conserved Domains (2) summary
      PRK06549
      Location:126 → 186
      PRK06549; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Validated
      cl19115
      Location:30 → 123
      Cupredoxin; Cupredoxin superfamily

    2. NM_001332484.1 → NP_001321361.1  Cupredoxin superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AQL6, Q9LPU4
    Nucleotide Protein
    Heading Accession and Version

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