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    Sf3b2 splicing factor 3B subunit 2 [ Drosophila busckii ]

    Gene ID: 108607624, updated on 16-May-2024

    Summary

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    Gene symbol
    Sf3b2
    Gene description
    splicing factor 3B subunit 2
    See related
    EnsemblRapid:LOC108607624
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila busckii
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
    Orthologs
    fruit fly all
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    Genomic context

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    See Sf3b2 in Genome Data Viewer
    Location:
    chromosome: 2L
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    101 current ASM1175060v1 (GCF_011750605.1) 2L NC_046604.1 (14258681..14261280)
    100 previous assembly ASM127793v1 (GCF_001277935.1) chr2L NC_030802.1 (8626298..8628896, complement)

    Chromosome 2L - NC_046604.1Genomic Context describing neighboring genes Neighboring gene zinc finger DHHC-type palmitoyltransferase GABPI Neighboring gene histidine protein methyltransferase 1 homolog Neighboring gene pre-mRNA processing factor 40 Neighboring gene lactosylceramide 4-alpha-galactosyltransferase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of U12-type spliceosomal complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of U2 snRNP IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of U2-type spliceosomal complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of catalytic step 2 spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of precatalytic spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    splicing factor 3B subunit 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila busckii Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1175060v1

    Genomic

    1. NC_046604.1 Reference ASM1175060v1

      Range
      14258681..14261280
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017998542.2 → XP_017854031.1  splicing factor 3B subunit 2 isoform X2

      Related
      XP_017854031.1, XM_017998542.2

    2. XM_017998541.1 → XP_017854030.1  splicing factor 3B subunit 2 isoform X1

      UniProtKB/TrEMBL
      A0A0M4E0G4
      Related
      XP_017854030.1, XM_017998541.1
    Nucleotide Protein Strain
    Heading Accession and Version

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