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    MICAL3 microtubule associated monooxygenase, calponin and LIM domain containing 3 [ Ficedula albicollis (Collared flycatcher) ]

    Gene ID: 101819614, updated on 3-Aug-2024

    Summary

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    Gene symbol
    MICAL3
    Gene description
    microtubule associated monooxygenase, calponin and LIM domain containing 3
    See related
    Ensembl:ENSFALG00000009619
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ficedula albicollis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Muscicapidae; Ficedula
    Orthologs
    human mouse all
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    Genomic context

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    See MICAL3 in Genome Data Viewer
    Location:
    chromosome: 1A
    Exon count:
    43
    Annotation release Status Assembly Chr Location
    101 current FicAlb1.5 (GCF_000247815.1) 1A NC_021672.1 (72410413..72574765)

    Chromosome 1A - NC_021672.1Genomic Context describing neighboring genes Neighboring gene tubulin alpha 8 Neighboring gene peroxisomal biogenesis factor 26 Neighboring gene uncharacterized LOC101819465 Neighboring gene BCL2 like 13 Neighboring gene BH3 interacting domain death agonist

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_021672.1 Chromosome 1A Reference FicAlb1.5 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables FAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein-methionine sulfoxide oxidase MICAL3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ficedula albicollis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference FicAlb1.5 Primary Assembly

    Genomic

    1. NC_021672.1 Reference FicAlb1.5 Primary Assembly

      Range
      72410413..72574765
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016306181.1 → XP_016161667.1  protein-methionine sulfoxide oxidase MICAL3 isoform X4

      UniProtKB/TrEMBL
      A0A803W4I1

    2. XM_016306179.1 → XP_016161665.1  protein-methionine sulfoxide oxidase MICAL3 isoform X1

      UniProtKB/TrEMBL
      A0A803W4I1
      Related
      ENSFALP00000018536.1, ENSFALT00000042261.1

    3. XM_005040368.2 → XP_005040425.1  protein-methionine sulfoxide oxidase MICAL3 isoform X2

      See identical proteins and their annotated locations for XP_005040425.1

      UniProtKB/TrEMBL
      A0A803W4I1
      Conserved Domains (4) summary
      cd09439
      Location:763 → 817
      LIM_Mical; The LIM domain of Mical (molecule interacting with CasL)
      pfam00307
      Location:523 → 618
      CH; Calponin homology (CH) domain
      pfam01494
      Location:87 → 274
      FAD_binding_3; FAD binding domain
      pfam12130
      Location:1926 → 2086
      DUF3585; Protein of unknown function (DUF3585)

    4. XM_016306180.1 → XP_016161666.1  protein-methionine sulfoxide oxidase MICAL3 isoform X3

      UniProtKB/TrEMBL
      A0A803VTR0
      Related
      ENSFALP00000028552.1, ENSFALT00000036309.1
      Conserved Domains (4) summary
      cd09439
      Location:763 → 817
      LIM_Mical; The LIM domain of Mical (molecule interacting with CasL)
      pfam00307
      Location:523 → 618
      CH; Calponin homology (CH) domain
      pfam01494
      Location:87 → 274
      FAD_binding_3; FAD binding domain
      pfam12130
      Location:1875 → 2035
      DUF3585; Protein of unknown function (DUF3585)

    5. XM_016306182.1 → XP_016161668.1  protein-methionine sulfoxide oxidase MICAL3 isoform X5

      UniProtKB/TrEMBL
      A0A803VTR0
      Related
      ENSFALP00000026116.1, ENSFALT00000038156.1
    Nucleotide Protein
    Heading Accession and Version

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