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    M05D6.2 T-complex protein 11-like protein 1 [ Caenorhabditis elegans ]

    Gene ID: 174353, updated on 9-Dec-2024

    Summary

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    Official Symbol
    M05D6.2
    Official Full Name
    T-complex protein 11-like protein 1
    Primary source
    WormBase:WBGene00010875
    Locus tag
    CELE_M05D6.2
    See related
    AllianceGenome:WB:WBGene00010875
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in signal transduction. Orthologous to several human genes including TCP11 (t-complex 11); TCP11L1 (t-complex 11 like 1); and TCP11L2 (t-complex 11 like 2). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See M05D6.2 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    7
    Sequence:
    Chromosome: II; NC_003280.10 (8468109..8470162)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Phenylalanine--tRNA ligase beta subunit Neighboring gene Calcium load-activated calcium channel homolog Neighboring gene ShKT domain-containing protein Neighboring gene pseudo Neighboring gene Protein kinase domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A protein domain-based interactome network for C. elegans early embryogenesis. Boxem M, et al. Cell, 2008 Aug 8. PMID 18692475, Free PMC Article
    2. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
    3. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in signal transduction IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    T-complex protein 11-like protein 1
    NP_495787.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      8468109..8470162
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_063386.8 → NP_495787.2  T-complex protein 11-like protein 1 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_495787.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5ECL1
      Conserved Domains (1) summary
      pfam05794
      Location:73 → 490
      Tcp11; T-complex protein 11
    Nucleotide Protein
    Heading Accession and Version

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