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    • Showing Current items.

    Y48B6A.5 Major sperm protein [ Caenorhabditis elegans ]

    Gene ID: 190017, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Y48B6A.5
    Official Full Name
    Major sperm protein
    Primary source
    WormBase:WBGene00012979
    Locus tag
    CELE_Y48B6A.5
    See related
    AllianceGenome:WB:WBGene00012979
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in cytoplasm; cytoskeleton; and pseudopodium. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Y48B6A.5 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    6
    Sequence:
    Chromosome: II; NC_003280.10 (14172833..14175199, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene 5'-3' exoribonuclease 2 homolog Neighboring gene ncRNA Neighboring gene Neuronal acetylcholine receptor subunit eat-2 Neighboring gene EF-hand domain-containing protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in cell projection IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in pseudopodium IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Major sperm protein
    NP_496960.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      14172833..14175199 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_064559.3 → NP_496960.1  Major sperm protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_496960.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9U2A7
      Conserved Domains (2) summary
      pfam00635
      Location:305 → 413
      Motile_Sperm; MSP (Major sperm protein) domain
      pfam03134
      Location:92 → 162
      TB2_DP1_HVA22; TB2/DP1, HVA22 family
    Nucleotide Protein
    Heading Accession and Version

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