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    • Showing Current items.

    mstr-2 Ubiquitin-like domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 186395, updated on 9-Dec-2024

    Summary

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    Official Symbol
    mstr-2
    Official Full Name
    Ubiquitin-like domain-containing protein
    Primary source
    WormBase:WBGene00010155
    Locus tag
    CELE_F56F3.4
    See related
    AllianceGenome:WB:WBGene00010155
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable zinc ion binding activity. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See mstr-2 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    6
    Sequence:
    Chromosome: III; NC_003281.10 (4469112..4470808)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Nose resistant-to-fluoxetine protein N-terminal domain-containing protein Neighboring gene tRNA-Arg Neighboring gene Translational repressor ifet-1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Transcriptional regulation. Okkema PG, et al. WormBook, 2005 Dec 23. PMID 18050428, Free PMC Article
    2. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Ubiquitin-like domain-containing protein
    NP_497908.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      4469112..4470808
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_065507.8 → NP_497908.1  Ubiquitin-like domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_497908.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q20899
      Conserved Domains (3) summary
      smart00154
      Location:276 → 315
      ZnF_AN1; AN1-like Zinc finger
      smart00213
      Location:22 → 94
      UBQ; Ubiquitin homologues
      pfam00240
      Location:32 → 96
      ubiquitin; Ubiquitin family
    Nucleotide Protein
    Heading Accession and Version

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