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    T14B4.1 tRNA/rRNA methyltransferase SpoU type domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 174110, updated on 9-Dec-2024

    Summary

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    Official Symbol
    T14B4.1
    Official Full Name
    tRNA/rRNA methyltransferase SpoU type domain-containing protein
    Primary source
    WormBase:WBGene00020498
    Locus tag
    CELE_T14B4.1
    See related
    AllianceGenome:WB:WBGene00020498
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable tRNA (guanine) methyltransferase activity. Predicted to be involved in tRNA methylation. Orthologous to human TARBP1 (TAR (HIV-1) RNA binding protein 1). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See T14B4.1 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    11
    Sequence:
    Chromosome: II; NC_003280.10 (6736904..6741480)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene VWFA domain-containing protein Neighboring gene 28S ribosomal protein S18c, mitochondrial Neighboring gene Ribosomal RNA-processing protein 43 Neighboring gene DUF2013 domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables RNA methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables tRNA (guanine) methyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in RNA processing IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in methylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in tRNA methylation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    tRNA/rRNA methyltransferase SpoU type domain-containing protein
    NP_495375.3
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      6736904..6741480
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_062974.7 → NP_495375.3  tRNA/rRNA methyltransferase SpoU type domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_495375.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q22484
      Conserved Domains (1) summary
      cd18091
      Location:1072 → 1216
      SpoU-like_TRM3-like; SAM-dependent tRNA methylase related to TRM3
    Nucleotide Protein
    Heading Accession and Version

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