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    F44E2.7 Putative zinc finger protein F44E2.7 [ Caenorhabditis elegans ]

    Gene ID: 176245, updated on 9-Dec-2024

    Summary

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    Official Symbol
    F44E2.7
    Official Full Name
    Putative zinc finger protein F44E2.7
    Primary source
    WormBase:WBGene00018420
    Locus tag
    CELE_F44E2.7
    See related
    AllianceGenome:WB:WBGene00018420
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable DNA binding activity and metal ion binding activity. Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See F44E2.7 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    7
    Sequence:
    Chromosome: III; NC_003281.10 (8845855..8848472, complement)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene Peptide-methionine (R)-S-oxide reductase;putative methionine-R-sulfoxide reductase B Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene Uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. In Vivo Interaction Proteomics in Caenorhabditis elegans Embryos Provides New Insights into P Granule Dynamics. Chen JX, et al. Mol Cell Proteomics, 2016 May. PMID 26912668, Free PMC Article
    2. A modified TurboID approach identifies tissue-specific centriolar components in C. elegans. Holzer E, et al. PLoS Genet, 2022 Apr. PMID 35442950, Free PMC Article
    3. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Putative zinc finger protein F44E2.7
    NP_001022588.1
    • Confirmed by transcript evidence
    NP_001367856.1
    • Confirmed by transcript evidence
    NP_741256.1
    • Confirmed by transcript evidence
    NP_741257.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      8845855..8848472 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_171218.6 → NP_741256.1  Putative zinc finger protein F44E2.7 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_741256.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P34437, Q629J7, Q8MQ44, Q8MQ45
      Conserved Domains (1) summary
      PTZ00121
      Location:124 → 273
      PTZ00121; MAEBL; Provisional

    2. NM_001027417.6 → NP_001022588.1  Putative zinc finger protein F44E2.7 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001022588.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P34437
      Conserved Domains (1) summary
      PTZ00121
      Location:122 → 271
      PTZ00121; MAEBL; Provisional

    3. NM_171219.3 → NP_741257.1  Putative zinc finger protein F44E2.7 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_741257.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P34437
      Conserved Domains (1) summary
      PTZ00121
      Location:64 → 213
      PTZ00121; MAEBL; Provisional

    4. NM_001379851.1 → NP_001367856.1  Putative zinc finger protein F44E2.7 [Caenorhabditis elegans]

      Status: REVIEWED

      Conserved Domains (1) summary
      PTZ00121
      Location:32 → 181
      PTZ00121; MAEBL; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P34437.2

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