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    chil-14 Glyco_18 domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 187730, updated on 9-Dec-2024

    Summary

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    Official Symbol
    chil-14
    Official Full Name
    Glyco_18 domain-containing protein
    Primary source
    WormBase:WBGene00019980
    Locus tag
    CELE_R09B5.12
    See related
    AllianceGenome:WB:WBGene00019980
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable oligosaccharide binding activity. Predicted to be active in endomembrane system. Orthologous to human CHID1 (chitinase domain containing 1). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See chil-14 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    6
    Sequence:
    Chromosome: V; NC_003283.11 (1455062..1456646)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Serpentine Receptor, class J;Serpentine receptor class gamma Neighboring gene ncRNA Neighboring gene 3-hydroxyacyl-CoA dehydrogenase Neighboring gene Solute carrier family 40 member

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Natural Infection of C. elegans by an Oomycete Reveals a New Pathogen-Specific Immune Response. Osman GA, et al. Curr Biol, 2018 Feb 19. PMID 29398216
    2. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
    3. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables oligosaccharide binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in endomembrane system IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Glyco_18 domain-containing protein
    NP_001300171.1
    • Partially confirmed by transcript evidence
    NP_503420.3
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      1455062..1456646
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_071019.5 → NP_503420.3  Glyco_18 domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_503420.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      O44609
      Conserved Domains (1) summary
      cl10447
      Location:65 → 387
      GH18_chitinase-like; The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods. Chitinases have ...

    2. NM_001313242.3 → NP_001300171.1  Glyco_18 domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3AV31
      Conserved Domains (1) summary
      cl10447
      Location:65 → 361
      GH18_chitinase-like; The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods. Chitinases have ...
    Nucleotide Protein
    Heading Accession and Version

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