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    ZK1055.6 DUF4139 domain-containing protein;Protein F37C4.5;Transposase [ Caenorhabditis elegans ]

    Gene ID: 179050, updated on 9-Dec-2024

    Summary

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    Official Symbol
    ZK1055.6
    Official Full Name
    DUF4139 domain-containing protein;Protein F37C4.5;Transposase
    Primary source
    WormBase:WBGene00022847
    Locus tag
    CELE_ZK1055.6
    See related
    AllianceGenome:WB:WBGene00022847
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be active in mitochondrion. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See ZK1055.6 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    4
    Sequence:
    Chromosome: V; NC_003283.11 (6599189..6602606, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene Nucleotide-diphospho-sugar transferase domain-containing protein Neighboring gene Nucleotide-diphospho-sugar transferase domain-containing protein Neighboring gene HoloCentric chromosome binding Protein Neighboring gene Protein F37C4.5 Neighboring gene HAT C-terminal dimerization domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    DUF4139 domain-containing protein;Protein F37C4.5;Transposase
    NP_001370637.1
    • Confirmed by transcript evidence
    NP_504678.1
    • Confirmed by transcript evidence
    NP_741556.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      6599189..6602606 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001383324.1 → NP_001370637.1  DUF4139 domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KZL9
      Conserved Domains (1) summary
      TIGR02231
      Location:10 → 525
      TIGR02231; conserved hypothetical protein

    2. NM_072277.6 → NP_504678.1  Protein F37C4.5 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_504678.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KZM0
      Conserved Domains (1) summary
      TIGR02231
      Location:13 → 558
      TIGR02231; conserved hypothetical protein

    3. NM_171474.5 → NP_741556.1  Transposase [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_741556.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MXF9
      Conserved Domains (1) summary
      TIGR02231
      Location:13 → 44
      TIGR02231; conserved hypothetical protein
    Nucleotide Protein
    Heading Accession and Version

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