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    F56D3.1 Apple domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 173750, updated on 18-Sep-2024

    Summary

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    Official Symbol
    F56D3.1
    Official Full Name
    Apple domain-containing protein
    Primary source
    WormBase:WBGene00018969
    Locus tag
    CELE_F56D3.1
    See related
    AllianceGenome:WB:WBGene00018969
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See F56D3.1 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    9
    Sequence:
    Chromosome: II; NC_003280.10 (4146339..4149678)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene DH domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Transcription factor ast-1 Neighboring gene Transmembrane protein Neighboring gene Ig-like domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. ITSN-1 controls vesicle recycling at the neuromuscular junction and functions in parallel with DAB-1. Wang W, et al. Traffic, 2008 May. PMID 18298590, Free PMC Article
    2. SH3 interactome conserves general function over specific form. Xin X, et al. Mol Syst Biol, 2013. PMID 23549480, Free PMC Article
    3. A modified TurboID approach identifies tissue-specific centriolar components in C. elegans. Holzer E, et al. PLoS Genet, 2022 Apr. PMID 35442950, Free PMC Article
    4. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article
    5. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    Apple domain-containing protein
    NP_494727.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      4146339..4149678
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_062326.7 → NP_494727.1  Apple domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_494727.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q20877
      Conserved Domains (1) summary
      TIGR04526
      Location:62 → 157
      predic_Ig_block; putative immunoglobulin-blocking virulence protein
    Nucleotide Protein
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