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    fbxa-12 F-box domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 183326, updated on 18-Sep-2024

    Summary

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    Official Symbol
    fbxa-12
    Official Full Name
    F-box domain-containing protein
    Primary source
    WormBase:WBGene00016525
    Locus tag
    CELE_C39B5.7
    See related
    AllianceGenome:WB:WBGene00016525
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See fbxa-12 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    3
    Sequence:
    Chromosome: III; NC_003281.10 (2219708..2222441)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Fungal lipase-like domain-containing protein Neighboring gene pseudo Neighboring gene Serpentine Receptor, class D (Delta) Neighboring gene F-box domain-containing protein Neighboring gene ncRNA Neighboring gene F-box domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The F-box protein family. Kipreos ET, et al. Genome Biol, 2000. PMID 11178263, Free PMC Article
    2. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

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    Preferred Names
    F-box domain-containing protein
    NP_497513.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      2219708..2222441
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_065112.2 → NP_497513.1  F-box domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_497513.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9N5X2
      Conserved Domains (2) summary
      smart00256
      Location:1 → 41
      FBOX; A Receptor for Ubiquitination Targets
      pfam01827
      Location:114 → 254
      FTH; FTH domain
    Nucleotide Protein
    Heading Accession and Version

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