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    C08E8.2 Strictosidine synthase conserved region domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 182407, updated on 9-Dec-2024

    Summary

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    Official Symbol
    C08E8.2
    Official Full Name
    Strictosidine synthase conserved region domain-containing protein
    Primary source
    WormBase:WBGene00007438
    Locus tag
    CELE_C08E8.2
    See related
    AllianceGenome:WB:WBGene00007438
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable hydrolase activity. Predicted to be involved in biosynthetic process. Orthologous to human APMAP (adipocyte plasma membrane associated protein). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See C08E8.2 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    3
    Sequence:
    Chromosome: V; NC_003283.11 (18353510..18355842, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene Salivary lipocalin Neighboring gene pseudo Neighboring gene Elongation factor 1-alpha

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables hydrolase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables strictosidine synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Strictosidine synthase conserved region domain-containing protein
    NP_507590.2
    • Predicted

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      18353510..18355842 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_075189.2 → NP_507590.2  Strictosidine synthase conserved region domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_507590.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      O62040
      Conserved Domains (1) summary
      cl22863
      Location:126 → 207
      Str_synth; Strictosidine synthase
    Nucleotide Protein
    Heading Accession and Version

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