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    del-2 DEgenerin Like [ Caenorhabditis elegans ]

    Gene ID: 177796, updated on 9-Dec-2024

    Summary

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    Official Symbol
    del-2
    Official Full Name
    DEgenerin Like
    Primary source
    WormBase:WBGene00000953
    Locus tag
    CELE_F58G6.6
    See related
    AllianceGenome:WB:WBGene00000953
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Is expressed in neurons. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See del-2 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    12
    Sequence:
    Chromosome: IV; NC_003282.8 (9636905..9642025, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Plasma membrane calcium-transporting ATPase mca-1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene DEGenerin channel-Like Neighboring gene Amphiphysin Neighboring gene Serpentine Receptor, class M

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetically targeted cell disruption in Caenorhabditis elegans. Harbinder S, et al. Proc Natl Acad Sci U S A, 1997 Nov 25. PMID 9371811, Free PMC Article
    2. Sexually dimorphic architecture and function of a mechanosensory circuit in C. elegans. Setty H, et al. Nat Commun, 2022 Nov 11. PMID 36369281, Free PMC Article
    3. Transducing touch in Caenorhabditis elegans. Goodman MB, et al. Annu Rev Physiol, 2003. PMID 12524464
    4. A proton-inhibited DEG/ENaC ion channel maintains neuronal ionstasis and promotes neuronal survival under stress. Petratou D, et al. iScience, 2023 Jul 21. PMID 37416472, Free PMC Article
    5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    DEgenerin Like
    NP_001255411.1
    • Product from WormBase gene class del;
      Confirmed by transcript evidence
    NP_001367239.1
    • Product from WormBase gene class del;
      Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      9636905..9642025 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001268482.3 → NP_001255411.1  DEgenerin Like [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001255411.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5ECD8

    2. NM_001380416.1 → NP_001367239.1  DEgenerin Like [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      D3YT21
    Nucleotide Protein
    Heading Accession and Version

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